BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013B03LP1|AL426466
(859 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1767 1574 0.0
>3x_Contig1767
Length = 23302
Score = 1574 bits (790), Expect = 0.0
Identities = 819/832 (98%), Gaps = 1/832 (0%)
Strand = Plus / Plus
Query: 1 acattgatcaagatctattcaagaagttgcaacaaaaacgatttgtataggctccgcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15330 acattgatcaagatctattcaagaagttgcaacaaaaacgatttgtataggctccgcata 15389
Query: 61 gaattcggtcactgacgcattagtagctgcaagtaacatatagtatactcaaacacaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15390 gaattcggtcactgacgcattagtagctgcaagtaacatatagtatactcaaacacaccc 15449
Query: 121 agataaatatatatatatntnnbbsgttaactcttgaatctatatgttagaatggttata 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 15450 agataaatatatatatatacaaaccgttaactcttgaatctatatgttagaatggttata 15509
Query: 181 agtctcgaggcgtttctttttctcaaagcatcaaggctaaaaattttccaatataaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15510 agtctcgaggcgtttctttttctcaaagcatcaaggctaaaaattttccaatataaagag 15569
Query: 241 atgagatgagatgagatggatgagatgaggcgctgtaacttgacgggtgagggttagatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15570 atgagatgagatgagatggatgagatgaggcgctgtaacttgacgggtgagggttagatc 15629
Query: 301 ttgttcmatctaaggcatataggtacgcaaaacggcaacaatggttaamggattcaagtt 360
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 15630 ttgttcaatctaaggcatataggtacgcaaaacggcaacaatggttaaaggattcaagtt 15689
Query: 361 gaaggagcttctgcaccgtcgtaaggctattgaccaaagcgaacagaaggtaacatccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15690 gaaggagcttctgcaccgtcgtaaggctattgaccaaagcgaacagaaggtaacatccaa 15749
Query: 421 aaagaccaaacaaccaagtccatctaatgctcaggacgaggagccagtgatagtcaccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15750 aaagaccaaacaaccaagtccatctaatgctcaggacgaggagccagtgatagtcaccaa 15809
Query: 481 ggatgacttgagagctgatgaggacgttgaaccagaagttgaatcagaagatgaagamga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 15810 ggatgacttgagagctgatgaggacgttgaaccagaagttgaatcagaagatgaagaaga 15869
Query: 541 gggggtaaccggcgagtacgagagccacgctttgtccagaaaagagaagagaaagttgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15870 gggggtaaccggcgagtacgagagccacgctttgtccagaaaagagaagagaaagttgaa 15929
Query: 601 gaagctgtccaagaagcagcaagccgaggagccttcgaagaagngnagaagaagaagagg 660
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 15930 gaagctgtccaagaagcagcaagccgaggagccttcgaagaag-ggagaagaagaagagg 15988
Query: 661 aagaagagcaggaagaagagcaggaagaagaagaagaagaagaatctgataatgagagtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15989 aagaagagcaggaagaagagcaggaagaagaagaagaagaagaatctgataatgagagtg 16048
Query: 721 acgaagaagatcgtctagatcttgagaagttggcaaacagtgactctgattccgattctg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16049 acgaagaagatcgtctagatcttgagaagttggcaaacagtgactctgattccgattctg 16108
Query: 781 atgaagaagaggaagaagaagaagaagaagaagaagaagaagaagaaaaaaa 832
||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 16109 atgaagaagaggaagaagaagaagaagaagaagaagaagaagaagaagaaaa 16160
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 25,047
Number of Sequences: 1807
Number of extensions: 25047
Number of successful extensions: 2290
Number of sequences better than 1.0e-20: 1
length of query: 859
length of database: 10,358,551
effective HSP length: 16
effective length of query: 843
effective length of database: 10,329,639
effective search space: 8707885677
effective search space used: 8707885677
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)